Table 1

Protein expression changes induced by TGF-β (24 hour treatment) in BRI-JM01 cells, identified by WGA affinity workflow.


BR1
BR2
BR3
Swiss-Prot
# pept
ratio1 ± SD
# pept
ratio ± SD
# pept
ratio ± SD

UP-REGULATED
Q06890|CLUS_MOUSE Clusterin precursor

9
4.21 ± 0.51
7
4.26 ± 0.17
3
4.25 ± 0.45
P11276|FINC_MOUSE Fibronectin precursor (FN)

7
1.85 ± 0.37
8
1.63 ± 0.69
3
1.92 ± 0.57
P11688|ITA5_MOUSE Integrin alpha-5

2
1.41 ± 0.21
2
1.97 ± 0.16
1
9.93 ± 1.33
NP_997551.1| Acid phosphatase, prostate isoform 1 [NP_062781.2]

1
1.40 ± 0.17
1
1.49 ± 0.21
0
--
O70309|ITB5_MOUSE Integrin beta-5

2
1.39 ± 0.14
2
0.99 ± 0.16
2
1.55 ± 0.10
NP_058085.1| Heterogeneous nuclear ribonucleoprotein U

2
1.36 ± 0.6
2
1.37 ± 0.27
0
--
P63260|ACTG_MOUSE Actin, cytoplasmic 2 [P60710]

8
1.34 ± 0.21
10
1.13 ± 0.08
6
1.62 ± 0.08







DOWN-REGULATED
Q9QZM0|UBQL2_MOUSE Ubiquilin-2

1
0.91 ± 0.71
3
0.69 ± 0.08
1
0.64 ± 0.16
Q8R143|PTTG_MOUSE Pituitary tumor-transforming gene 1

2
0.80 ± 0.05
2
0.70 ± 0.04
0
--
P35951|LDLR_MOUSE Low-density lipoprotein receptor precursor

1
0.62 ± 0.11
1
0.71 ± 0.06
0
--
Q61739|ITA6_MOUSE Integrin alpha-6

13
0.57 ± 0.08
13
0.79 ± 0.04
4
0.87 ± 0.03
NP_598424.2| Integrin beta 4

15
0.56 ± 0.08
15
0.84 ± 0.05
3
0.98 ± 0.22
NP_064431.2| tumor-associated calcium signal transducer 2

2
0.51 ± 0.12
2
0.57 ± 0.05
0
--

1abundance in TGF-β/abundance in CTL

Hill et al. Proteome Science 2009 7:2   doi:10.1186/1477-5956-7-2

Open Data